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Gut microbiota
The gut microbiota is the community of bacteria, archaea, fungi and viruses that lives in the digestive tract of animals. The colon holds the densest microbial community scientists have studied in humans, with between 300 and 1,000 species, although about 99 per cent of gut bacteria come from roughly 30 or 40 species. These microbes break down food that human enzymes cannot, produce vitamins and short-chain fatty acids, train the immune system and help block harmful pathogens. They also communicate with the brain through the gut-brain axis. Imbalances in this community, called dysbiosis, have been linked to inflammatory bowel disease, some cancers and neurological conditions, and researchers are developing microbiome-based treatments in response. The collective genes of these microbes outnumber those in the human genome many times over.
Gut microbes ferment fibre that human enzymes cannot digest, releasing short-chain fatty acids that nourish the gut lining and signal to immune cells. They also compete with harmful bacteria for space and nutrients. Through nerves, hormones and immune messengers, these signals reach the brain, which is the basis of the gut-brain axis.
Scientists now see the gut as an organ shaped by trillions of microbes, which changes how medicine thinks about digestion, immunity and even mood. It is a major reason microbiome-targeted therapies are being developed.
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Image: Wikimedia Commons
